Craving something that’s both cozy and quick? These Greek Yogurt Pumpkin Muffins bring fall’s best flavors together in a muffin that’s tender, fragrant, and effortless. With rich pumpkin, spices, and protein-packed Greek yogurt, each bite feels both indulgent and wholesome.
Perfect for mornings on the go or as a sweet afternoon pick-me-up, this easy Greek yogurt pumpkin muffins recipe takes just a few simple ingredients and delivers bakery-worthy comfort every time.
Why You’ll Love This Greek Yogurt Pumpkin Muffins
- Quick and easy to make, perfect for busy mornings.
- Moist and flavorful, thanks to the Greek yogurt and pumpkin.
- Healthier than traditional muffins, packed with fiber and protein.
- Versatile recipe that allows for fun add-ins like nuts or chocolate chips.
- Great for meal prep; they store well for days!
Greek Yogurt Pumpkin Muffins
- Total Time: 30 minutes
- Yield: 12 muffins 1x
- Diet: Vegetarian
Description
A delicious and easy recipe for Greek Yogurt Pumpkin Muffins that are moist and flavorful, perfect for fall.
Ingredients
- 1 cup canned pumpkin puree
- 2/3 cup maple syrup or honey
- 1/4 cup 2% Greek yogurt, plain or vanilla
- 1/4 cup vegetable oil
- 1 egg
- 2 teaspoons vanilla extract
- 1 2/3 cups whole wheat flour
- 1 teaspoon cinnamon
- 1/4 teaspoon nutmeg
- 1/2 teaspoon baking soda
- 1/2 teaspoon baking powder
- 1/2 teaspoon salt
Instructions
- Preheat oven to 350°F. Line muffin pan with muffin liners and set aside.
- In a large bowl combine the pumpkin puree, maple syrup/honey, and Greek yogurt.
- Beat in the oil, egg, and vanilla extract.
- In another large bowl whisk together the flour, cinnamon, nutmeg, baking soda, baking powder, and salt.
- Add the dry ingredients to the wet ingredients and stir until incorporated (batter will be thick). Do not over mix.
- Scoop the batter into the muffin pan distributing it evenly between the muffin cups.
- Bake for 18 – 20 minutes.
- Cool in pan for 10 minutes then remove.
Notes
- For a sweeter muffin, increase the amount of maple syrup or honey.
- These muffins can be stored in an airtight container for up to 3 days.
- Feel free to add nuts or chocolate chips for extra flavor.
- Prep Time: 10 minutes
- Cook Time: 20 minutes
- Category: Baking
- Method: Baking
- Cuisine: American
Nutrition
- Serving Size: 1 muffin
- Calories: 150
- Sugar: 8g
- Sodium: 150mg
- Fat: 5g
- Saturated Fat: 1g
- Unsaturated Fat: 4g
- Trans Fat: 0g
- Carbohydrates: 24g
- Fiber: 3g
- Protein: 3g
- Cholesterol: 20mg
Keywords: Greek Yogurt Pumpkin Muffins, pumpkin muffins, healthy muffins, fall recipes
Ingredients for Greek Yogurt Pumpkin Muffins
Gathering the right ingredients is the first step to creating these delicious Greek Yogurt Pumpkin Muffins. Here’s what you’ll need:
- Canned pumpkin puree: This is the star of the show! It adds moisture and that lovely pumpkin flavor.
- Maple syrup or honey: Both sweeteners bring a natural sweetness. Maple syrup gives a unique flavor, while honey adds a floral note.
- Greek yogurt: This ingredient keeps the muffins moist and adds a protein boost. You can use plain or vanilla for a hint of sweetness.
- Vegetable oil: It helps create a tender crumb. You can substitute with melted coconut oil for a different flavor.
- Egg: This binds everything together and adds richness to the muffins.
- Vanilla extract: A splash of vanilla enhances the overall flavor, making each bite more delightful.
- Whole wheat flour: This adds fiber and nutrients, making the muffins healthier. You can use all-purpose flour if you prefer a lighter texture.
- Cinnamon: A warm spice that brings out the fall flavors in the muffins.
- Nutmeg: Just a pinch adds a lovely depth of flavor, complementing the pumpkin perfectly.
- Baking soda and baking powder: These leavening agents help the muffins rise and become fluffy.
- Salt: A little salt balances the sweetness and enhances the flavors.
For those who like to experiment, feel free to add nuts or chocolate chips for extra texture and flavor. You can find the exact quantities for each ingredient at the bottom of the article, ready for printing!

How to Make Greek Yogurt Pumpkin Muffins
Now that you have all your ingredients ready, let’s dive into the fun part—making these delicious Greek Yogurt Pumpkin Muffins! Follow these simple steps, and you’ll have a batch of warm, fragrant muffins in no time.
Step 1: Preheat the Oven
First things first, preheat your oven to 350°F. This step is crucial because it ensures your muffins bake evenly. While the oven warms up, line your muffin pan with liners. This makes for easy cleanup and helps the muffins pop out effortlessly.
Step 2: Mix Wet Ingredients
In a large bowl, combine the canned pumpkin puree, maple syrup or honey, and Greek yogurt. Use a whisk or a spatula to mix them until smooth. This mixture is the heart of your muffins, bringing moisture and flavor. The Greek yogurt adds a creamy texture that makes each bite delightful!
Step 3: Add Egg and Oil
Next, beat in the vegetable oil and egg. The oil helps keep the muffins tender, while the egg acts as a binder, holding everything together. Make sure to mix well, so the ingredients are fully incorporated. You want a smooth batter that’s ready to rise!
Step 4: Combine Dry Ingredients
In another bowl, whisk together the whole wheat flour, cinnamon, nutmeg, baking soda, baking powder, and salt. This step is essential for evenly distributing the leavening agents and spices. The aroma of cinnamon and nutmeg will already start to fill your kitchen, making it feel like fall!
Step 5: Mix Wet and Dry Ingredients
Now, it’s time to combine the wet and dry ingredients. Gently fold the dry mixture into the wet mixture. Be careful not to overmix; a few lumps are perfectly fine. Overmixing can lead to dense muffins, and we want them light and fluffy!
Step 6: Fill Muffin Pan
Using a scoop or spoon, evenly distribute the batter into the muffin cups. Fill each cup about two-thirds full to allow room for rising. This ensures that each muffin bakes evenly and has that perfect dome shape.
Step 7: Bake the Muffins
Pop the muffin pan into the preheated oven and bake for 18 to 20 minutes. Keep an eye on them! You’ll know they’re done when a toothpick inserted in the center comes out clean. The smell will be heavenly, and you might find it hard to wait!
Step 8: Cool and Serve
Once baked, let the muffins cool in the pan for about 10 minutes. This helps them set and makes them easier to remove. After that, transfer them to a wire rack to cool completely. Store any leftovers in an airtight container for up to three days, if they last that long!

Tips for Success
- Measure your ingredients accurately for the best results.
- Don’t skip the preheating step; it’s key for even baking.
- Use a toothpick to check for doneness; it should come out clean.
- Let the muffins cool completely before storing to maintain moisture.
- Experiment with add-ins like nuts or chocolate chips for extra flavor!
Equipment Needed
- Muffin pan: A standard 12-cup muffin pan works best, but you can use silicone molds for easy removal.
- Mixing bowls: Use at least two—one for wet ingredients and one for dry.
- Whisk or spatula: Essential for mixing ingredients smoothly.
- Measuring cups and spoons: Accurate measurements are key to perfect muffins.
- Cooling rack: Helps muffins cool evenly and prevents sogginess.
Variations To Try
- Chocolate Chip Greek Yogurt Pumpkin Muffins: Add a handful of chocolate chips to the batter for a sweet twist that kids will love.
- Nuts and Seeds: Toss in some chopped walnuts or pumpkin seeds for added crunch and nutrition.
- Spiced Pumpkin Muffins: Enhance the flavor by adding a pinch of ginger or allspice to the dry ingredients.
- Gluten-Free Option: Substitute whole wheat flour with a gluten-free flour blend for a delicious gluten-free version.
- Vegan Version: Replace the egg with a flax egg (1 tablespoon ground flaxseed mixed with 2.5 tablespoons water) and use a plant-based yogurt.
Serving Suggestions
- Pair your Greek Yogurt Pumpkin Muffins with a warm cup of spiced chai or coffee for a cozy breakfast.
- Serve them alongside a dollop of cream cheese frosting for a delightful treat.
- For a festive touch, sprinkle some powdered sugar on top before serving.
- Enjoy them with a side of fresh fruit for a balanced snack.
FAQs about Greek Yogurt Pumpkin Muffins
Can I use fresh pumpkin instead of canned?
Absolutely! If you have fresh pumpkin, just roast it, scoop out the flesh, and puree it. It will give your Greek Yogurt Pumpkin Muffins a fresh taste.
How can I make these muffins sweeter?
If you prefer a sweeter muffin, simply increase the amount of maple syrup or honey. You can also add chocolate chips for an extra sweet touch!
Can I freeze Greek Yogurt Pumpkin Muffins?
Yes! These muffins freeze beautifully. Just wrap them individually in plastic wrap and store them in an airtight container. They’ll be ready to enjoy whenever you need a quick snack.
What can I substitute for Greek yogurt?
If you don’t have Greek yogurt on hand, you can use regular yogurt or even applesauce for a different flavor and texture. Just keep in mind that it may alter the moisture level slightly.
How long do these muffins last?
When stored in an airtight container, your Greek Yogurt Pumpkin Muffins will stay fresh for up to three days at room temperature. For longer storage, consider freezing them!
Conclusion
Baking these Greek Yogurt Pumpkin Muffins isn’t just about filling your home with warm autumn scents—it’s about sharing moments of comfort and delight. They’re soft, flavorful, and just sweet enough to feel indulgent without the sugar overload.
If pumpkin’s still calling your name, treat yourself next to a slice of cozy Pumpkin Pecan Muffins, or add a creamy swirl with our tangy Pumpkin Cream Cheese Muffins. They complement these Greek yogurt muffins beautifully.

